Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfite reductase (nadph) hemoprotein beta-component | SAMN05421512_109182 | Not Available | Positive | 3492050 - 3493708 | 61359.0 |
| phosphoadenylylsulfate reductase (thioredoxin) | SAMN05421512_109183 | Not Available | Positive | 3493695 - 3494450 | 27403.7 |
| phosphoadenosine phosphosulfate reductase | SAMN05421512_109184 | Not Available | Positive | 3494453 - 3494977 | 18685.2 |
| ferredoxin--nadp+ reductase | SAMN05421512_109185 | Not Available | Positive | 3495060 - 3495872 | 29739.7 |
| nudix-type nucleoside diphosphatase, yffh/adpp family | SAMN05421512_109186 | Not Available | Positive | 3495951 - 3496580 | 22900.9 |
| hypothetical protein | SAMN05421512_109187 | Not Available | Positive | 3496621 - 3497625 | 35504.8 |
| lytic murein transglycosylase | SAMN05421512_109188 | Not Available | Positive | 3497699 - 3498946 | 44781.6 |
| response regulator receiver modulated diguanylate cyclase | SAMN05421512_109189 | Not Available | Negative | 3498982 - 3500235 | 46022.5 |
| 3-oxoacid coa-transferase subunit b | SAMN05421512_109190 | Not Available | Negative | 3500732 - 3501367 | 22476.2 |
| 3-oxoacid coa-transferase subunit a | SAMN05421512_109191 | Not Available | Negative | 3501385 - 3502080 | 24898.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
