Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ba14k-like protein | SAMN05421512_109172 | Not Available | Positive | 3481027 - 3481368 | 12457.6 |
| hypothetical protein | SAMN05421512_109173 | Not Available | Negative | 3481445 - 3482689 | 43165.1 |
| methyltransferase, fkbm family | SAMN05421512_109174 | Not Available | Negative | 3482718 - 3483491 | 28730.6 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421512_109175 | Not Available | Negative | 3483557 - 3484369 | 30367.9 |
| porin subfamily protein | SAMN05421512_109176 | Not Available | Positive | 3484776 - 3484903 | 4260.12 |
| hypothetical protein | SAMN05421512_109177 | Not Available | Positive | 3487179 - 3487387 | 7458.74 |
| acetyl-coa c-acetyltransferase | SAMN05421512_109178 | Not Available | Positive | 3487688 - 3488854 | 40823.7 |
| 2-haloacid dehalogenase | SAMN05421512_109179 | Not Available | Negative | 3488937 - 3489638 | 25413.2 |
| uroporphyrinogen-iii c-methyltransferase | SAMN05421512_109180 | Not Available | Positive | 3490201 - 3491646 | 50471.7 |
| protein of unknown function | SAMN05421512_109181 | Not Available | Positive | 3491668 - 3491973 | 11167.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
