Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kynurenine formamidase | SAMN05421512_109152 | Not Available | Positive | 3463641 - 3464270 | 22269.8 |
| amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN05421512_109153 | Not Available | Positive | 3464348 - 3465136 | 28833.0 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05421512_109154 | Not Available | Positive | 3465133 - 3465840 | 25206.6 |
| branched-chain amino acid transport system permease protein/neutral amino acid transport system permease protein | SAMN05421512_109155 | Not Available | Positive | 3465846 - 3466718 | 30875.1 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05421512_109156 | Not Available | Positive | 3466733 - 3467716 | 35590.2 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05421512_109157 | Not Available | Positive | 3467904 - 3469103 | 40565.9 |
| transcriptional regulator, badm/rrf2 family | SAMN05421512_109158 | Not Available | Negative | 3469229 - 3469714 | 17339.0 |
| hypothetical protein | SAMN05421512_109159 | Not Available | Negative | 3469782 - 3470444 | 24711.7 |
| transcriptional regulator, tetr family | SAMN05421512_109160 | Not Available | Positive | 3470530 - 3471309 | 27146.9 |
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase | SAMN05421512_109161 | Not Available | Positive | 3471306 - 3472112 | 28513.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
