Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN05421512_109131 | Not Available | Positive | 3442938 - 3445970 | 109715.0 |
| type i secretion system abc transporter, prtd family | SAMN05421512_109132 | Not Available | Positive | 3446145 - 3447857 | 60671.3 |
| membrane fusion protein prse | SAMN05421512_109133 | Not Available | Positive | 3447859 - 3449199 | 49541.7 |
| ribonuclease vapc | SAMN05421512_109134 | Not Available | Negative | 3449221 - 3449649 | 14831.6 |
| antitoxin vapb | SAMN05421512_109135 | Not Available | Negative | 3449649 - 3449894 | 9236.0 |
| hydroxymethylpyrimidine kinase /phosphomethylpyrimidine kinase | SAMN05421512_109137 | Not Available | Positive | 3450263 - 3451132 | 29141.9 |
| glycine oxidase | SAMN05421512_109138 | Not Available | Positive | 3451129 - 3452139 | 36564.0 |
| sulfur carrier protein | SAMN05421512_109139 | Not Available | Positive | 3452108 - 3452305 | 6651.87 |
| thiazole-phosphate synthase | SAMN05421512_109140 | Not Available | Positive | 3452309 - 3453082 | 27050.7 |
| thiamine-phosphate diphosphorylase | SAMN05421512_109141 | Not Available | Positive | 3453079 - 3453681 | 21816.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
