Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| delta-9 acyl-phospholipid desaturase | SAMN05421512_109121 | Not Available | Positive | 3432969 - 3433946 | 37013.2 |
| acyl carrier protein | SAMN05421512_109122 | Not Available | Positive | 3433980 - 3434267 | 10102.9 |
| cyclopropane-fatty-acyl-phospholipid synthase | SAMN05421512_109123 | Not Available | Positive | 3434279 - 3435166 | 33855.8 |
| hypothetical protein | SAMN05421512_109124 | Not Available | Positive | 3435284 - 3436576 | 47437.1 |
| medium-chain acyl-[acyl-carrier-protein] hydrolase | SAMN05421512_109125 | Not Available | Positive | 3436573 - 3437403 | 30258.3 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN05421512_109126 | Not Available | Positive | 3437379 - 3439178 | 65640.1 |
| uncharacterized domain 1-containing protein | SAMN05421512_109127 | Not Available | Positive | 3439255 - 3439680 | 15032.1 |
| taurine catabolism dioxygenase taud, tfda family | SAMN05421512_109128 | Not Available | Positive | 3439720 - 3440745 | 38413.3 |
| ribulose-5-phosphate 4-epimerase/fuculose-1-phosphate aldolase | SAMN05421512_109129 | Not Available | Positive | 3440816 - 3441625 | 30072.7 |
| probable biosynthetic protein, pnap_2097 family | SAMN05421512_109130 | Not Available | Positive | 3441677 - 3442621 | 35378.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
