Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase/fumarate reductase, flavoprotein subunit | SAMN05421512_109111 | Not Available | Negative | 3423153 - 3424853 | 60179.8 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05421512_109112 | Not Available | Negative | 3424850 - 3425611 | 26352.5 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05421512_109113 | Not Available | Negative | 3425638 - 3426372 | 25098.2 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN05421512_109114 | Not Available | Negative | 3426455 - 3427576 | 40173.9 |
| trap transporter, dctm subunit | SAMN05421512_109115 | Not Available | Negative | 3427647 - 3428951 | 44992.2 |
| trap-type mannitol/chloroaromatic compound transport system, small permease component | SAMN05421512_109116 | Not Available | Negative | 3428962 - 3429486 | 18937.8 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05421512_109117 | Not Available | Negative | 3429489 - 3430247 | 26181.3 |
| transcriptional regulator, gntr family | SAMN05421512_109118 | Not Available | Positive | 3430389 - 3431132 | 27334.6 |
| glutathione s-transferase | SAMN05421512_109119 | Not Available | Positive | 3431152 - 3431766 | 22388.0 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05421512_109120 | Not Available | Negative | 3431847 - 3432500 | 22991.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
