Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, gntr family | SAMN05421512_109101 | Not Available | Negative | 3412194 - 3412949 | 27662.7 |
| hypothetical protein | SAMN05421512_109102 | Not Available | Negative | 3412972 - 3414138 | 43111.1 |
| peptide/nickel transport system atp-binding protein | SAMN05421512_109103 | Not Available | Negative | 3414157 - 3415254 | 40003.2 |
| peptide/nickel transport system atp-binding protein | SAMN05421512_109104 | Not Available | Negative | 3415251 - 3416354 | 39630.1 |
| peptide/nickel transport system permease protein | SAMN05421512_109105 | Not Available | Negative | 3416354 - 3417259 | 33167.2 |
| peptide/nickel transport system permease protein | SAMN05421512_109106 | Not Available | Negative | 3417256 - 3418221 | 35605.3 |
| peptide/nickel transport system substrate-binding protein | SAMN05421512_109107 | Not Available | Negative | 3418332 - 3419957 | 59764.7 |
| fumarylacetoacetate hydrolase | SAMN05421512_109108 | Not Available | Positive | 3420268 - 3421494 | 44049.3 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05421512_109109 | Not Available | Positive | 3421494 - 3422345 | 30704.9 |
| fumarylpyruvate hydrolase | SAMN05421512_109110 | Not Available | Positive | 3422372 - 3423067 | 25234.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
