Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421512_10991 | Not Available | Negative | 3401451 - 3401861 | 15052.9 |
| transcriptional regulator, lysr family | SAMN05421512_10992 | Not Available | Negative | 3402010 - 3402903 | 31917.6 |
| nicotinamidase-related amidase | SAMN05421512_10993 | Not Available | Positive | 3403047 - 3403700 | 23568.2 |
| predicted snoal-like aldol condensation-catalyzing enzyme | SAMN05421512_10994 | Not Available | Positive | 3403811 - 3404539 | 26819.6 |
| zinc transport system substrate-binding protein | SAMN05421512_10995 | Not Available | Positive | 3405007 - 3406821 | 65610.3 |
| d-alanine--d-alanine ligase | SAMN05421512_10996 | Not Available | Negative | 3406887 - 3407957 | 37819.6 |
| dna-binding transcriptional regulator, lysr family | SAMN05421512_10997 | Not Available | Negative | 3408093 - 3408989 | 31183.8 |
| hypothetical protein | SAMN05421512_10998 | Not Available | Positive | 3409077 - 3409820 | 25861.1 |
| transcriptional regulator, lysr family | SAMN05421512_10999 | Not Available | Negative | 3409864 - 3410772 | 33214.1 |
| mfs transporter, dha1 family, inner membrane transport protein | SAMN05421512_109100 | Not Available | Positive | 3410959 - 3412143 | 40010.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
