Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protease i | SAMN05421512_101165 | Not Available | Negative | 177398 - 177967 | 20096.9 |
| sporulation protein ylmc, prc-barrel domain family | SAMN05421512_101166 | Not Available | Negative | 178159 - 178791 | 21579.4 |
| matrixin | SAMN05421512_101167 | Not Available | Negative | 178986 - 179957 | 34660.6 |
| transcriptional regulator, tetr family | SAMN05421512_101168 | Not Available | Positive | 180340 - 180993 | 23426.8 |
| ketol-acid reductoisomerase | SAMN05421512_101169 | Not Available | Positive | 181048 - 182067 | 36723.2 |
| dihydrofolate reductase | SAMN05421512_101170 | Not Available | Positive | 182187 - 182729 | 19417.2 |
| s-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase | SAMN05421512_101171 | Not Available | Positive | 182850 - 183959 | 39536.7 |
| helix-turn-helix | SAMN05421512_101172 | Not Available | Positive | 184058 - 184468 | 14618.4 |
| elaa protein | SAMN05421512_101173 | Not Available | Positive | 184477 - 185016 | 19197.0 |
| s-formylglutathione hydrolase | SAMN05421512_101174 | Not Available | Positive | 185048 - 185890 | 30281.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
