Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative acetyltransferase | SAMN05421512_10961 | Not Available | Positive | 3373201 - 3373728 | 18082.6 |
| trna pseudouridine38-40 synthase | SAMN05421512_10962 | Not Available | Positive | 3373758 - 3374588 | 30019.4 |
| uncharacterized membrane protein | SAMN05421512_10963 | Not Available | Negative | 3374528 - 3375418 | 31688.4 |
| succinyldiaminopimelate desuccinylase | SAMN05421512_10964 | Not Available | Negative | 3375558 - 3376730 | 41143.5 |
| uncharacterized membrane protein yhah, duf805 family | SAMN05421512_10965 | Not Available | Negative | 3376781 - 3377209 | 15844.6 |
| methyltransferase domain-containing protein | SAMN05421512_10966 | Not Available | Positive | 3377415 - 3378080 | 24976.0 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | SAMN05421512_10967 | Not Available | Negative | 3378123 - 3378983 | 30284.4 |
| uncharacterized membrane protein | SAMN05421512_10968 | Not Available | Positive | 3379148 - 3380053 | 31675.6 |
| phosphonoacetate hydrolase | SAMN05421512_10969 | Not Available | Negative | 3380088 - 3380612 | 18430.1 |
| zinc-binding alcohol dehydrogenase family protein | SAMN05421512_10970 | Not Available | Negative | 3380719 - 3381735 | 36778.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
