Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein flp/pila | SAMN05421512_10941 | Not Available | Positive | 3353883 - 3354059 | 5951.39 |
| prepilin peptidase cpaa | SAMN05421512_10942 | Not Available | Positive | 3354281 - 3354787 | 17851.7 |
| pilus assembly protein cpab | SAMN05421512_10943 | Not Available | Positive | 3355041 - 3355817 | 27054.4 |
| pilus assembly protein cpac | SAMN05421512_10944 | Not Available | Positive | 3355857 - 3357266 | 49573.7 |
| pilus assembly protein cpad | SAMN05421512_10945 | Not Available | Positive | 3357278 - 3358039 | 26657.5 |
| pilus assembly protein cpae | SAMN05421512_10946 | Not Available | Positive | 3358058 - 3359380 | 47428.0 |
| pilus assembly protein cpaf | SAMN05421512_10947 | Not Available | Positive | 3359427 - 3360941 | 54636.5 |
| tight adherence protein b | SAMN05421512_10948 | Not Available | Positive | 3360934 - 3361956 | 36967.0 |
| tight adherence protein c | SAMN05421512_10949 | Not Available | Positive | 3361999 - 3362979 | 36624.8 |
| flp pilus assembly protein tadd, contains tpr repeats | SAMN05421512_10950 | Not Available | Negative | 3363072 - 3363899 | 29401.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
