Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421512_10931 | Not Available | Positive | 3345417 - 3346181 | 27053.5 |
| ribokinase | SAMN05421512_10932 | Not Available | Positive | 3346231 - 3347154 | 30734.8 |
| aspartyl protease family protein | SAMN05421512_10933 | Not Available | Positive | 3347303 - 3347815 | 18010.2 |
| aldose 1-epimerase | SAMN05421512_10934 | Not Available | Positive | 3347911 - 3348936 | 36864.4 |
| acetoin utilization deacetylase acuc | SAMN05421512_10935 | Not Available | Positive | 3348933 - 3349964 | 37130.7 |
| 2-haloacid dehalogenase | SAMN05421512_10936 | Not Available | Negative | 3349973 - 3350590 | 22968.2 |
| phosphonate transport system substrate-binding protein | SAMN05421512_10937 | Not Available | Positive | 3350695 - 3351759 | 36167.1 |
| flp pilus assembly protein tadg | SAMN05421512_10938 | Not Available | Negative | 3351767 - 3352381 | 22752.5 |
| tade-like protein | SAMN05421512_10939 | Not Available | Negative | 3352384 - 3352956 | 21232.8 |
| pilus formation protein n terminal region | SAMN05421512_10940 | Not Available | Negative | 3353006 - 3353485 | 16963.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
