Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside abc transporter membrane protein | SAMN05421512_10921 | Not Available | Positive | 3335887 - 3336993 | 39132.1 |
| nucleoside abc transporter membrane protein | SAMN05421512_10922 | Not Available | Positive | 3337007 - 3337975 | 33576.4 |
| cytidine deaminase | SAMN05421512_10923 | Not Available | Positive | 3337996 - 3338406 | 14465.2 |
| purine-nucleoside phosphorylase | SAMN05421512_10924 | Not Available | Positive | 3338403 - 3339215 | 28814.6 |
| deoxyribose-phosphate aldolase | SAMN05421512_10925 | Not Available | Positive | 3339208 - 3339984 | 26922.4 |
| thymidine phosphorylase | SAMN05421512_10926 | Not Available | Positive | 3339989 - 3341311 | 45380.4 |
| phosphopentomutase | SAMN05421512_10927 | Not Available | Positive | 3341396 - 3342616 | 43186.1 |
| phytanoyl-coa hydroxylase | SAMN05421512_10928 | Not Available | Positive | 3342708 - 3343571 | 31800.3 |
| adenosine deaminase | SAMN05421512_10929 | Not Available | Positive | 3343575 - 3344597 | 36665.8 |
| uracil phosphoribosyltransferase | SAMN05421512_10930 | Not Available | Positive | 3344739 - 3345368 | 23051.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
