Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux pump | SAMN05421512_108215 | Not Available | Positive | 3292647 - 3295709 | 111486.0 |
| transcriptional regulator, iclr family | SAMN05421512_108216 | Not Available | Negative | 3296317 - 3297126 | 29397.3 |
| microcystin degradation protein mlrc, contains duf1485 domain | SAMN05421512_108217 | Not Available | Positive | 3297358 - 3298899 | 54290.9 |
| peptide/nickel transport system substrate-binding protein | SAMN05421512_108218 | Not Available | Positive | 3299005 - 3300645 | 59466.8 |
| peptide/nickel transport system permease protein | SAMN05421512_108219 | Not Available | Positive | 3300884 - 3301825 | 34434.5 |
| peptide/nickel transport system permease protein | SAMN05421512_108220 | Not Available | Positive | 3301883 - 3302767 | 31285.4 |
| peptide/nickel transport system atp-binding protein | SAMN05421512_108221 | Not Available | Positive | 3302770 - 3304431 | 60928.3 |
| hippurate hydrolase | SAMN05421512_108222 | Not Available | Positive | 3304469 - 3305632 | 41457.6 |
| glutamate carboxypeptidase | SAMN05421512_108223 | Not Available | Positive | 3305662 - 3306792 | 40618.7 |
| transposase is116/is110/is902 family protein | SAMN05421512_108224 | Not Available | Negative | 3307141 - 3307462 | 11315.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
