Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine zipper | SAMN05421512_101155 | Not Available | Positive | 170073 - 170342 | 8555.51 |
| glycine zipper | SAMN05421512_101156 | Not Available | Positive | 170470 - 170739 | 8479.15 |
| l-alanine dehydrogenase | SAMN05421512_101157 | Not Available | Negative | 170830 - 171966 | 38581.4 |
| transcriptional regulator, asnc family | SAMN05421512_101158 | Not Available | Positive | 172104 - 172604 | 18826.7 |
| putative two-component system response regulator | SAMN05421512_101159 | Not Available | Positive | 172758 - 173231 | 16427.9 |
| sugar lactone lactonase yvre | SAMN05421512_101160 | Not Available | Positive | 173335 - 174216 | 32007.9 |
| upf0176 protein | SAMN05421512_101161 | Not Available | Negative | 174206 - 174997 | 29196.5 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421512_101162 | Not Available | Negative | 175085 - 175798 | 25092.3 |
| trans-2,3-dihydro-3-hydroxyanthranilate isomerase | SAMN05421512_101163 | Not Available | Positive | 176006 - 176923 | 33087.6 |
| predicted dna-binding protein, contains ribbon-helix-helix (rhh) domain | SAMN05421512_101164 | Not Available | Negative | 176946 - 177308 | 13942.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
