Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, gntr family | SAMN05421512_108205 | Not Available | Negative | 3280226 - 3280939 | 26221.4 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN05421512_108206 | Not Available | Positive | 3281109 - 3282113 | 35747.6 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN05421512_108207 | Not Available | Positive | 3282281 - 3282766 | 17760.2 |
| trap transporter, dctm subunit | SAMN05421512_108208 | Not Available | Positive | 3282763 - 3284079 | 46547.1 |
| malonyl-coa decarboxylase | SAMN05421512_108209 | Not Available | Positive | 3284076 - 3285440 | 50790.6 |
| malonyl-coa/methylmalonyl-coa synthetase | SAMN05421512_108210 | Not Available | Positive | 3285437 - 3286954 | 54309.1 |
| rhodanese-related sulfurtransferase | SAMN05421512_108211 | Not Available | Negative | 3287023 - 3287586 | 20144.3 |
| methyl-accepting chemotaxis protein | SAMN05421512_108212 | Not Available | Negative | 3287764 - 3289566 | 64497.3 |
| hypothetical protein | SAMN05421512_108213 | Not Available | Positive | 3289775 - 3291304 | 55312.3 |
| membrane fusion protein, multidrug efflux system | SAMN05421512_108214 | Not Available | Positive | 3291459 - 3292643 | 41110.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
