Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid transport system substrate-binding protein | SAMN05421512_108185 | Not Available | Positive | 3261454 - 3262830 | 49956.5 |
| hypothetical protein | SAMN05421512_108186 | Not Available | Positive | 3262827 - 3263048 | 8332.43 |
| uncharacterized conserved protein, duf697 family | SAMN05421512_108187 | Not Available | Negative | 3263217 - 3263867 | 22579.9 |
| uncharacterized conserved protein, duf697 family | SAMN05421512_108188 | Not Available | Negative | 3264054 - 3264764 | 24577.6 |
| plasmid segregation oscillating atpase parf | SAMN05421512_108189 | Not Available | Negative | 3264761 - 3265417 | 23322.1 |
| hypothetical protein | SAMN05421512_108190 | Not Available | Positive | 3265622 - 3267451 | 68132.3 |
| hypothetical protein | SAMN05421512_108191 | Not Available | Negative | 3267378 - 3268367 | 36216.5 |
| protein of unknown function | SAMN05421512_108192 | Not Available | Negative | 3268408 - 3268977 | 21112.2 |
| peptide chain release factor 3 | SAMN05421512_108193 | Not Available | Positive | 3269158 - 3270798 | 61307.0 |
| 8-oxo-dgtp pyrophosphatase mutt, nudix family | SAMN05421512_108194 | Not Available | Positive | 3270994 - 3271503 | 19134.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
