Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyketide biosynthesis enoyl-coa hydratase pksh | SAMN05421512_108175 | Not Available | Positive | 3209002 - 3209775 | 27704.4 |
| asparagine synthase (glutamine-hydrolysing) | SAMN05421512_108176 | Not Available | Negative | 3209739 - 3211748 | 74085.1 |
| phosphopantetheine attachment site | SAMN05421512_108177 | Not Available | Negative | 3211804 - 3212052 | 9645.39 |
| putative atp-binding cassette transporter | SAMN05421512_108178 | Not Available | Positive | 3212510 - 3214111 | 59255.7 |
| putative atp-binding cassette transporter | SAMN05421512_108179 | Not Available | Positive | 3214114 - 3215763 | 60857.8 |
| trans-at polyketide synthase, acyltransferase and oxidoreductase domain-containing protein | SAMN05421512_108180 | Not Available | Positive | 3215760 - 3218123 | 84665.6 |
| acyl transferase domain-containing protein | SAMN05421512_108181 | Not Available | Positive | 3218120 - 3238822 | 728385.0 |
| predicted flavoprotein czco associated with the cation diffusion facilitator czcd | SAMN05421512_108182 | Not Available | Positive | 3238819 - 3240156 | 49410.6 |
| amino acid adenylation domain-containing protein | SAMN05421512_108183 | Not Available | Positive | 3240153 - 3260438 | 716904.0 |
| regulator of protease activity hflc, stomatin/prohibitin superfamily | SAMN05421512_108184 | Not Available | Positive | 3260583 - 3261449 | 33109.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
