Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron(iii) transport system permease protein | SAMN05421512_108125 | Not Available | Negative | 3155318 - 3157060 | 63521.3 |
| iron(iii) transport system atp-binding protein | SAMN05421512_108126 | Not Available | Negative | 3157100 - 3158206 | 40013.0 |
| cubico group peptidase, beta-lactamase class c family | SAMN05421512_108127 | Not Available | Positive | 3158557 - 3159720 | 41814.6 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN05421512_108128 | Not Available | Positive | 3159763 - 3160422 | 23323.3 |
| 4-pyridoxate dehydrogenase | SAMN05421512_108129 | Not Available | Positive | 3160409 - 3162067 | 57808.7 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05421512_108130 | Not Available | Negative | 3162101 - 3162979 | 32414.7 |
| acyl-coa dehydrogenase | SAMN05421512_108131 | Not Available | Positive | 3163210 - 3164418 | 44466.1 |
| e-phenylitaconyl-coa hydratase | SAMN05421512_108132 | Not Available | Positive | 3164418 - 3165191 | 27632.5 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05421512_108133 | Not Available | Positive | 3165188 - 3166393 | 43493.1 |
| acetyl-coa acetyltransferase | SAMN05421512_108134 | Not Available | Positive | 3166393 - 3167517 | 38632.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
