Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter substrate-binding protein, paat family | SAMN05421512_108115 | Not Available | Positive | 3146315 - 3147166 | 29587.9 |
| amino acid abc transporter membrane protein 1, paat family | SAMN05421512_108116 | Not Available | Positive | 3147297 - 3147962 | 24304.9 |
| amino acid abc transporter membrane protein 2, paat family | SAMN05421512_108117 | Not Available | Positive | 3147966 - 3148634 | 24504.5 |
| amino acid abc transporter atp-binding protein, paat family | SAMN05421512_108118 | Not Available | Positive | 3148634 - 3149455 | 30415.1 |
| threonine dehydratase | SAMN05421512_108119 | Not Available | Positive | 3149452 - 3150447 | 34132.7 |
| ornithine cyclodeaminase | SAMN05421512_108120 | Not Available | Positive | 3150437 - 3151429 | 34171.2 |
| abc-type fe3+ transport system, substrate-binding protein | SAMN05421512_108121 | Not Available | Negative | 3151524 - 3152606 | 38641.0 |
| dna-binding transcriptional regulator, fadr family | SAMN05421512_108122 | Not Available | Positive | 3152926 - 3153681 | 27697.2 |
| putative lumazine-binding | SAMN05421512_108123 | Not Available | Negative | 3153857 - 3154243 | 13931.5 |
| predicted oxidoreductase | SAMN05421512_108124 | Not Available | Negative | 3154240 - 3155256 | 37136.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
