Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannose-binding protein /fructose-binding protein /ribose-binding protein | SAMN05421512_101145 | Not Available | Positive | 158482 - 159498 | 34985.8 |
| mannose abc transporter membrane protein /fructose abc transporter membrane protein /ribose abc transporter membrane protein | SAMN05421512_101146 | Not Available | Positive | 159633 - 160709 | 38222.6 |
| mannose abc transporter atp-binding protein /fructose abc transporter atp-binding protein /ribose abc transporter atp-binding protein | SAMN05421512_101147 | Not Available | Positive | 160706 - 161485 | 28121.5 |
| fructokinase | SAMN05421512_101148 | Not Available | Positive | 161535 - 162464 | 32039.2 |
| glucose-6-phosphate 1-dehydrogenase | SAMN05421512_101149 | Not Available | Positive | 162495 - 163967 | 54328.1 |
| 6-phosphogluconate dehydratase | SAMN05421512_101150 | Not Available | Positive | 164146 - 165981 | 64076.8 |
| 2-keto-3-deoxy-phosphogluconate aldolase | SAMN05421512_101151 | Not Available | Positive | 166009 - 166653 | 21737.3 |
| hypothetical protein | SAMN05421512_101152 | Not Available | Positive | 166801 - 167121 | 11003.6 |
| cation:h+ antiporter | SAMN05421512_101153 | Not Available | Positive | 167266 - 168192 | 31198.4 |
| glucose-6-phosphate isomerase | SAMN05421512_101154 | Not Available | Positive | 168245 - 169870 | 58565.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
