Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421512_102373 | Not Available | Negative | 985230 - 985415 | 6941.43 |
| Portal protein | SAMN05421512_102374 | Not Available | Negative | 985415 - 986620 | 43183.1 |
| Large packaging protein | SAMN05421512_102375 | Not Available | Negative | 986736 - 988013 | 46782.2 |
| Hypothetical protein | SAMN05421512_10883 | Not Available | Positive | 3111476 - 3114301 | 97309.1 |
| Trna,type:phe,anti_codon:gaa; | Not Available | Not Available | Positive | 3114484 - 3114559 | Not Available |
| Attl | Not Available | Not Available | Positive | 3114512 - 3114561 | Not Available |
| Phage integrase family site specific recombinase | SAMN05421512_10885 | Not Available | Negative | 3114630 - 3115700 | 39918.2 |
| Excisionase | SAMN05421512_10886 | Not Available | Negative | 3115704 - 3115940 | 8433.13 |
| Minor capsid protein | SAMN05421512_10887 | Not Available | Negative | 3116051 - 3116386 | 11005.0 |
| hypothetical protein | SAMN05421512_10888 | Not Available | Negative | 3116389 - 3116604 | 7742.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
