Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN05421512_108105 | Not Available | Positive | 3134210 - 3135292 | 38488.8 |
| trap-type mannitol/chloroaromatic compound transport system, small permease component | SAMN05421512_108106 | Not Available | Positive | 3135298 - 3135849 | 19671.8 |
| trap transporter, dctm subunit | SAMN05421512_108107 | Not Available | Positive | 3135851 - 3137131 | 45314.7 |
| arylformamidase | SAMN05421512_108108 | Not Available | Positive | 3137417 - 3138307 | 32152.2 |
| hypothetical protein | SAMN05421512_108109 | Not Available | Positive | 3138348 - 3139301 | 33572.0 |
| trap transporter, 4tm/12tm fusion protein | SAMN05421512_108110 | Not Available | Positive | 3139375 - 3141324 | 67773.0 |
| dna-binding transcriptional regulator, lysr family | SAMN05421512_108111 | Not Available | Negative | 3141327 - 3142262 | 34543.0 |
| hypothetical protein | SAMN05421512_108112 | Not Available | Positive | 3142335 - 3144020 | 59830.9 |
| hypothetical protein | SAMN05421512_108113 | Not Available | Positive | 3144368 - 3144490 | 4451.42 |
| transcriptional regulator, gntr family | SAMN05421512_108114 | Not Available | Negative | 3145137 - 3145859 | 27341.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
