Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage dna packaging protein, nu1 subunit of terminase | SAMN05421512_10896 | Not Available | Negative | 3124058 - 3124537 | 17671.3 |
| aaa domain-containing protein | SAMN05421512_10897 | Not Available | Negative | 3124794 - 3126692 | 68929.6 |
| Trna-pseudo | Not Available | Not Available | Positive | 3126901 - 3126980 | Not Available |
| transcriptional regulator, lysr family | SAMN05421512_10898 | Not Available | Negative | 3127084 - 3127983 | 33203.2 |
| tripartite atp-independent transporter solute receptor, dctp family | SAMN05421512_10899 | Not Available | Positive | 3128121 - 3129107 | 35561.5 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN05421512_108100 | Not Available | Positive | 3129162 - 3129656 | 18523.7 |
| trap transporter, dctm subunit | SAMN05421512_108101 | Not Available | Positive | 3129653 - 3130951 | 45117.6 |
| ketopantoate reductase | SAMN05421512_108102 | Not Available | Positive | 3130983 - 3132017 | 37354.0 |
| transcriptional regulator, lysr family | SAMN05421512_108103 | Not Available | Negative | 3132007 - 3132927 | 34217.5 |
| protein of unknown function | SAMN05421512_108104 | Not Available | Positive | 3133095 - 3134141 | 37677.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
