Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidinol dehydrogenase | SAMN05421512_10873 | Not Available | Positive | 3101542 - 3102837 | 45142.8 |
| uncharacterized protein, upf0262 family | SAMN05421512_10874 | Not Available | Positive | 3102965 - 3103444 | 18051.9 |
| protein tyrosine phosphatase | SAMN05421512_10875 | Not Available | Positive | 3103449 - 3103949 | 17756.3 |
| bacterial translation initiation factor 1 (bif-1) | SAMN05421512_10876 | Not Available | Positive | 3104062 - 3104280 | 8356.29 |
| septum formation protein | SAMN05421512_10877 | Not Available | Positive | 3104336 - 3105019 | 24217.2 |
| long-chain acyl-coa synthetase | SAMN05421512_10878 | Not Available | Positive | 3105193 - 3106704 | 54188.7 |
| hypothetical protein | SAMN05421512_10879 | Not Available | Positive | 3106799 - 3107026 | 8384.75 |
| fecr family protein | SAMN05421512_10880 | Not Available | Positive | 3107135 - 3107968 | 28873.3 |
| 5'-nucleotidase | SAMN05421512_10881 | Not Available | Positive | 3108165 - 3109802 | 57548.4 |
| tetratricopeptide repeat-containing protein | SAMN05421512_10882 | Not Available | Positive | 3110169 - 3111428 | 46761.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
