Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05421512_10863 | Not Available | Positive | 3090405 - 3091283 | 30983.9 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05421512_10864 | Not Available | Positive | 3091283 - 3092320 | 37126.4 |
| glutathione s-transferase | SAMN05421512_10865 | Not Available | Positive | 3092325 - 3093119 | 29873.0 |
| catechol 1,2-dioxygenase | SAMN05421512_10866 | Not Available | Positive | 3093116 - 3094060 | 34711.9 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05421512_10867 | Not Available | Positive | 3094053 - 3094811 | 25633.0 |
| uncharacterized conserved protein, duf849 family | SAMN05421512_10868 | Not Available | Positive | 3094811 - 3095689 | 31318.0 |
| nadph:quinone reductase | SAMN05421512_10869 | Not Available | Positive | 3095719 - 3096729 | 35806.0 |
| cupin domain-containing protein | SAMN05421512_10870 | Not Available | Positive | 3096726 - 3097061 | 11847.3 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN05421512_10871 | Not Available | Positive | 3097518 - 3100898 | 122323.0 |
| protein of unknown function | SAMN05421512_10872 | Not Available | Positive | 3101051 - 3101488 | 15880.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
