Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactonate dehydratase | SAMN05421512_10843 | Not Available | Positive | 3068964 - 3070133 | 42176.4 |
| carbohydrate abc transporter substrate-binding protein, cut1 family | SAMN05421512_10844 | Not Available | Positive | 3070155 - 3071432 | 46372.1 |
| carbohydrate abc transporter membrane protein 1, cut1 family | SAMN05421512_10845 | Not Available | Positive | 3071521 - 3072429 | 33223.8 |
| carbohydrate abc transporter membrane protein 2, cut1 family | SAMN05421512_10846 | Not Available | Positive | 3072443 - 3073273 | 30139.2 |
| carbohydrate abc transporter atp-binding protein, cut1 family | SAMN05421512_10847 | Not Available | Positive | 3073277 - 3074383 | 40076.2 |
| udp-glucose 4-epimerase | SAMN05421512_10848 | Not Available | Positive | 3074383 - 3075357 | 35045.8 |
| transcriptional regulator, iclr family | SAMN05421512_10849 | Not Available | Positive | 3075333 - 3077060 | 61324.0 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421512_10850 | Not Available | Positive | 3077057 - 3077824 | 26319.5 |
| hypothetical protein | SAMN05421512_10851 | Not Available | Negative | 3077843 - 3078202 | 13230.4 |
| transcriptional regulator, iclr family | SAMN05421512_10852 | Not Available | Positive | 3078503 - 3079306 | 28586.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
