Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05421512_10833 | Not Available | Positive | 3060017 - 3061141 | 40875.4 |
| branched-chain amino acid transport system permease protein | SAMN05421512_10834 | Not Available | Positive | 3061310 - 3062224 | 32503.9 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05421512_10835 | Not Available | Positive | 3062217 - 3063227 | 36174.0 |
| amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN05421512_10836 | Not Available | Positive | 3063218 - 3063979 | 27136.7 |
| branched-chain amino acid transport system atp-binding protein | SAMN05421512_10837 | Not Available | Positive | 3063976 - 3064686 | 25329.3 |
| l-2-amino-thiazoline-4-carboxylic acid hydrolase | SAMN05421512_10838 | Not Available | Positive | 3064888 - 3065358 | 17940.6 |
| hypothetical protein | SAMN05421512_10839 | Not Available | Negative | 3065398 - 3066303 | 31559.8 |
| 2-keto-3-deoxy-phosphogalactonate aldolase | SAMN05421512_10840 | Not Available | Negative | 3066335 - 3066967 | 21689.3 |
| 2-keto-3-deoxygalactonate kinase | SAMN05421512_10841 | Not Available | Negative | 3066964 - 3067929 | 33970.5 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05421512_10842 | Not Available | Positive | 3068044 - 3068967 | 32137.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
