Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter atp-binding protein, cut1 family | SAMN05421512_10823 | Not Available | Negative | 3048018 - 3049109 | 38491.5 |
| hypothetical protein | SAMN05421512_10824 | Not Available | Negative | 3049165 - 3049797 | 21584.0 |
| transcriptional regulator, deor family | SAMN05421512_10825 | Not Available | Positive | 3049860 - 3050606 | 26579.9 |
| hypothetical protein | SAMN05421512_10826 | Not Available | Negative | 3050659 - 3053061 | 84974.0 |
| nadh-quinone oxidoreductase subunit l/nad(p)h-quinone oxidoreductase subunit 5 | SAMN05421512_10827 | Not Available | Negative | 3053080 - 3054633 | 52690.0 |
| lysr family transcriptional regulator, transcriptional activator of nhaa | SAMN05421512_10828 | Not Available | Positive | 3054748 - 3055674 | 32601.8 |
| lrp/asnc family transcriptional regulator | SAMN05421512_10829 | Not Available | Positive | 3056084 - 3056353 | 10267.3 |
| selenocysteine lyase/cysteine desulfurase | SAMN05421512_10830 | Not Available | Positive | 3056340 - 3058079 | 61901.8 |
| glycine/d-amino acid oxidase | SAMN05421512_10831 | Not Available | Positive | 3058093 - 3059391 | 46739.8 |
| l-2-amino-thiazoline-4-carboxylic acid hydrolase | SAMN05421512_10832 | Not Available | Positive | 3059427 - 3059936 | 18561.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
