Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421512_1083 | Not Available | Positive | 3026778 - 3027281 | 18609.0 |
| hypothetical protein | SAMN05421512_1084 | Not Available | Positive | 3027446 - 3028678 | 43962.2 |
| hypothetical protein | SAMN05421512_1085 | Not Available | Positive | 3028694 - 3029200 | 18986.4 |
| hypothetical protein | SAMN05421512_1086 | Not Available | Positive | 3029208 - 3029645 | 15736.5 |
| phage tail tape measure protein, tp901 family, core region | SAMN05421512_1087 | Not Available | Positive | 3029846 - 3032146 | 79874.3 |
| hypothetical protein | SAMN05421512_1088 | Not Available | Positive | 3032143 - 3032532 | 14422.6 |
| p2-like prophage tail protein x | SAMN05421512_1089 | Not Available | Positive | 3032541 - 3032777 | 8639.16 |
| hypothetical protein | SAMN05421512_10810 | Not Available | Positive | 3032774 - 3033790 | 36338.9 |
| site-specific dna-methyltransferase (adenine-specific) | SAMN05421512_10811 | Not Available | Positive | 3034159 - 3034863 | 26107.9 |
| peptide/nickel transport system atp-binding protein | SAMN05421512_10812 | Not Available | Negative | 3035233 - 3037029 | 65528.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
