Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN05421512_101135 | Not Available | Positive | 145164 - 145862 | 26235.2 |
| trap-type mannitol/chloroaromatic compound transport system, substrate-binding protein | SAMN05421512_101136 | Not Available | Negative | 145911 - 147122 | 43371.4 |
| transcriptional regulator, asnc family | SAMN05421512_101137 | Not Available | Positive | 147303 - 147539 | 8751.5 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05421512_101138 | Not Available | Negative | 147565 - 148545 | 34695.9 |
| xanthine dehydrogenase, molybdenum binding subunit apoprotein | SAMN05421512_101139 | Not Available | Negative | 148685 - 150988 | 81673.0 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05421512_101140 | Not Available | Positive | 151292 - 152290 | 35540.6 |
| dna binding domain-containing protein, excisionase family | SAMN05421512_101141 | Not Available | Negative | 152309 - 153178 | 31773.0 |
| long-chain acyl-coa synthetase | SAMN05421512_101142 | Not Available | Negative | 153291 - 155003 | 62673.2 |
| adenine deaminase | SAMN05421512_101143 | Not Available | Negative | 155184 - 156905 | 61211.4 |
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN05421512_101144 | Not Available | Positive | 157132 - 158430 | 46201.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
