Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| demethylmenaquinone methyltransferase | SAMN05421512_107273 | Not Available | Negative | 3003375 - 3004172 | 29186.9 |
| dna-(apurinic or apyrimidinic site) lyase | SAMN05421512_107274 | Not Available | Positive | 3004396 - 3005301 | 32891.6 |
| enoyl-coa hydratase | SAMN05421512_107275 | Not Available | Positive | 3005440 - 3006213 | 28079.0 |
| ssu ribosomal protein s20p | SAMN05421512_107276 | Not Available | Positive | 3006410 - 3006676 | 9655.83 |
| chromosomal replication initiator protein dnaa | SAMN05421512_107277 | Not Available | Positive | 3007841 - 3009319 | 54509.5 |
| dna polymerase iii, beta subunit | SAMN05421512_107278 | Not Available | Positive | 3009496 - 3010614 | 40754.9 |
| dna replication and repair protein recf | SAMN05421512_107279 | Not Available | Positive | 3010704 - 3011843 | 40730.0 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05421512_107280 | Not Available | Positive | 3011905 - 3012522 | 21143.8 |
| dna gyrase subunit b | SAMN05421512_107281 | Not Available | Positive | 3012737 - 3015190 | 89439.0 |
| ssu ribosomal protein s12p | SAMN05421512_107282 | Not Available | Positive | 3015371 - 3015742 | 13709.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
