Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine recombinase xerc subunit | SAMN05421512_107263 | Not Available | Negative | 2991698 - 2992657 | 34515.6 |
| transaldolase | SAMN05421512_107264 | Not Available | Negative | 2992745 - 2993398 | 23056.9 |
| replication restart dna helicase pria | SAMN05421512_107265 | Not Available | Positive | 2993590 - 2995815 | 79885.1 |
| atp synthase f1 subcomplex delta subunit | SAMN05421512_107266 | Not Available | Positive | 2996073 - 2996633 | 19652.9 |
| atp synthase f1 subcomplex alpha subunit | SAMN05421512_107267 | Not Available | Positive | 2996633 - 2998162 | 54987.3 |
| atp synthase f1 subcomplex gamma subunit | SAMN05421512_107268 | Not Available | Positive | 2998196 - 2999074 | 31895.5 |
| atp synthase f1 subcomplex beta subunit | SAMN05421512_107269 | Not Available | Positive | 2999099 - 3000538 | 51342.0 |
| atp synthase f1 subcomplex epsilon subunit | SAMN05421512_107270 | Not Available | Positive | 3000563 - 3000970 | 14270.9 |
| alkylated dna repair protein (dna oxidative demethylase) | SAMN05421512_107271 | Not Available | Positive | 3001124 - 3001774 | 23590.3 |
| 2-octaprenylphenol hydroxylase | SAMN05421512_107272 | Not Available | Negative | 3001799 - 3003367 | 57840.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
