Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase subunit b | SAMN05421512_107243 | Not Available | Positive | 2972895 - 2973677 | 29769.7 |
| uncharacterized conserved protein, mapeg superfamily | SAMN05421512_107244 | Not Available | Negative | 2973750 - 2974127 | 13711.6 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN05421512_107245 | Not Available | Positive | 2974285 - 2974626 | 11638.1 |
| protein-tyrosine-phosphatase | SAMN05421512_107246 | Not Available | Positive | 2974856 - 2975305 | 16044.5 |
| acetyltransferase (gnat) family protein | SAMN05421512_107247 | Not Available | Negative | 2975319 - 2975894 | 21265.7 |
| protease inhibitor inh | SAMN05421512_107248 | Not Available | Positive | 2976239 - 2976811 | 19283.7 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN05421512_107249 | Not Available | Positive | 2976876 - 2977277 | 14444.5 |
| cell division protein zape | SAMN05421512_107250 | Not Available | Positive | 2977416 - 2978582 | 42877.8 |
| malate dehydrogenase (nad) | SAMN05421512_107251 | Not Available | Positive | 2978725 - 2979687 | 33588.6 |
| succinyl-coa synthetase (adp-forming) beta subunit | SAMN05421512_107252 | Not Available | Positive | 2979765 - 2980958 | 42233.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
