Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase-3 subunit gamma/tau | SAMN05421512_107232 | Not Available | Negative | 2962226 - 2964187 | 69881.2 |
| acetyl-coa synthetase | SAMN05421512_107234 | Not Available | Negative | 2964498 - 2966147 | 59222.1 |
| diadenosine tetraphosphate (ap4a) hydrolase | SAMN05421512_107235 | Not Available | Positive | 2966344 - 2966760 | 14972.3 |
| nad+ diphosphatase | SAMN05421512_107236 | Not Available | Positive | 2966806 - 2967744 | 33904.6 |
| broad specificity phosphatase phoe | SAMN05421512_107237 | Not Available | Positive | 2967747 - 2968346 | 21672.6 |
| cysz protein | SAMN05421512_107238 | Not Available | Positive | 2968426 - 2969085 | 23593.7 |
| succinate dehydrogenase subunit c | SAMN05421512_107239 | Not Available | Positive | 2969290 - 2969688 | 14911.5 |
| succinate dehydrogenase subunit d | SAMN05421512_107240 | Not Available | Positive | 2969703 - 2970086 | 13902.3 |
| succinate dehydrogenase subunit a | SAMN05421512_107241 | Not Available | Positive | 2970092 - 2971921 | 66557.9 |
| methyltransferase, fkbm family | SAMN05421512_107242 | Not Available | Positive | 2971983 - 2972825 | 30922.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
