Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssu ribosomal protein s15p | SAMN05421512_107212 | Not Available | Positive | 2937250 - 2937519 | 10283.5 |
| polyribonucleotide nucleotidyltransferase | SAMN05421512_107213 | Not Available | Positive | 2937783 - 2939900 | 75512.9 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN05421512_107214 | Not Available | Negative | 2940025 - 2942796 | 102838.0 |
| monosaccharide abc transporter substrate-binding protein, cut2 family | SAMN05421512_107215 | Not Available | Negative | 2942793 - 2943977 | 44198.9 |
| dihydrodipicolinate reductase | SAMN05421512_107216 | Not Available | Positive | 2944193 - 2945005 | 28339.9 |
| phosphoglycerate mutase | SAMN05421512_107217 | Not Available | Positive | 2945045 - 2945665 | 22950.4 |
| sugar or nucleoside kinase, ribokinase family | SAMN05421512_107218 | Not Available | Negative | 2945755 - 2946756 | 35396.0 |
| prephenate dehydratase | SAMN05421512_107219 | Not Available | Negative | 2946801 - 2947691 | 32495.9 |
| 3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase) | SAMN05421512_107220 | Not Available | Negative | 2947705 - 2948469 | 27008.5 |
| cytochrome c | SAMN05421512_107221 | Not Available | Positive | 2948674 - 2949447 | 26503.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
