Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| apolipoprotein n-acyltransferase | SAMN05421512_107202 | Not Available | Positive | 2925363 - 2926958 | 57697.4 |
| transcriptional regulator, contains xre-family hth domain | SAMN05421512_107203 | Not Available | Positive | 2927166 - 2927573 | 14849.0 |
| methionine adenosyltransferase | SAMN05421512_107204 | Not Available | Positive | 2927782 - 2928954 | 42165.9 |
| trna (guanine-n7-)-methyltransferase | SAMN05421512_107205 | Not Available | Positive | 2929088 - 2929774 | 26318.3 |
| ribosome maturation factor rimp | SAMN05421512_107206 | Not Available | Positive | 2929952 - 2930527 | 21171.3 |
| nusa antitermination factor | SAMN05421512_107207 | Not Available | Positive | 2930632 - 2932275 | 60613.5 |
| hypothetical protein | SAMN05421512_107208 | Not Available | Positive | 2932319 - 2932999 | 23777.4 |
| bacterial translation initiation factor 2 (bif-2) | SAMN05421512_107209 | Not Available | Positive | 2933007 - 2935676 | 96588.2 |
| ribosome-binding factor a | SAMN05421512_107210 | Not Available | Positive | 2935815 - 2936267 | 16925.1 |
| trna pseudouridine synthase b | SAMN05421512_107211 | Not Available | Positive | 2936272 - 2937246 | 34846.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
