Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide-binding universal stress protein, uspa family | SAMN05421512_107192 | Not Available | Positive | 2916741 - 2917235 | 17468.9 |
| fe-s cluster biogenesis protein nfua, 4fe-4s-binding domain | SAMN05421512_107193 | Not Available | Positive | 2917419 - 2917973 | 20226.0 |
| trna threonylcarbamoyladenosine biosynthesis protein tsab | SAMN05421512_107194 | Not Available | Positive | 2918131 - 2918799 | 21952.5 |
| ribosomal-protein-alanine n-acetyltransferase | SAMN05421512_107195 | Not Available | Positive | 2918796 - 2919284 | 17847.4 |
| fur family transcriptional regulator, ferric uptake regulator | SAMN05421512_107196 | Not Available | Positive | 2919371 - 2919841 | 17955.1 |
| lyso-ornithine lipid acyltransferase | SAMN05421512_107197 | Not Available | Positive | 2919846 - 2920724 | 31900.2 |
| pp_02643 | SAMN05421512_107198 | Not Available | Positive | 2920861 - 2922342 | Not Available |
| phosphate starvation-inducible protein phoh | SAMN05421512_107199 | Not Available | Positive | 2922389 - 2923495 | 39986.9 |
| probable rrna maturation factor | SAMN05421512_107200 | Not Available | Positive | 2923492 - 2924025 | 19375.5 |
| cbs domain-containing protein | SAMN05421512_107201 | Not Available | Positive | 2924032 - 2925177 | 42298.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
