Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter, ppp family, 3-phenylpropionic acid transporter | SAMN05421512_101125 | Not Available | Negative | 130813 - 132051 | 41875.9 |
| chemotaxis phosphatase, chez | SAMN05421512_101126 | Not Available | Positive | 132178 - 133347 | 42946.1 |
| hypothetical protein | SAMN05421512_101127 | Not Available | Positive | 133535 - 134584 | 39205.2 |
| threonine dehydratase | SAMN05421512_101128 | Not Available | Negative | 134713 - 135702 | 33958.0 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421512_101129 | Not Available | Negative | 135790 - 136824 | 37542.3 |
| udp-2,3-diacylglucosamine pyrophosphatase lpxh | SAMN05421512_101130 | Not Available | Negative | 136821 - 137630 | 30768.5 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05421512_101131 | Not Available | Positive | 137836 - 138615 | 27261.8 |
| long-chain fatty acid transport protein | SAMN05421512_101132 | Not Available | Negative | 138696 - 140015 | 47048.2 |
| multidrug efflux pump subunit acrb | SAMN05421512_101133 | Not Available | Negative | 140372 - 143563 | 114456.0 |
| rnd family efflux transporter, mfp subunit | SAMN05421512_101134 | Not Available | Negative | 143560 - 144750 | 41270.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
