Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone dnaj | SAMN05421512_107172 | Not Available | Negative | 2895710 - 2896834 | 40471.6 |
| methyltransferase, fkbm family | SAMN05421512_107173 | Not Available | Negative | 2896834 - 2897709 | 31301.9 |
| molecular chaperone dnak | SAMN05421512_107174 | Not Available | Negative | 2897938 - 2899860 | 68823.2 |
| sulfate permease, sulp family | SAMN05421512_107175 | Not Available | Positive | 2900291 - 2901775 | 52120.0 |
| nucleotide-binding universal stress protein, uspa family | SAMN05421512_107176 | Not Available | Positive | 2901795 - 2902655 | 30266.9 |
| pyridoxamine 5'-phosphate oxidase | SAMN05421512_107177 | Not Available | Positive | 2902823 - 2903458 | 23882.1 |
| protein of unknown function | SAMN05421512_107178 | Not Available | Positive | 2903579 - 2904067 | 16233.3 |
| molybdate transport system regulatory protein | SAMN05421512_107179 | Not Available | Positive | 2904208 - 2904576 | 12671.3 |
| molybdate transport system substrate-binding protein | SAMN05421512_107180 | Not Available | Positive | 2904718 - 2905521 | 27033.3 |
| molybdate transport system permease protein | SAMN05421512_107181 | Not Available | Positive | 2905614 - 2906309 | 24357.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
