Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421512_107162 | Not Available | Positive | 2886980 - 2887690 | 25586.3 |
| phosphonate transport system substrate-binding protein | SAMN05421512_107163 | Not Available | Positive | 2887687 - 2888661 | 35055.4 |
| phosphonate transport system atp-binding protein | SAMN05421512_107164 | Not Available | Positive | 2888797 - 2889615 | 30034.4 |
| phosphonate transport system permease protein | SAMN05421512_107165 | Not Available | Positive | 2889619 - 2890431 | 29826.5 |
| phosphonate transport system permease protein | SAMN05421512_107166 | Not Available | Positive | 2890433 - 2891248 | 29627.8 |
| uncharacterized conserved protein, cupin superfamily | SAMN05421512_107167 | Not Available | Positive | 2891356 - 2891868 | 18050.2 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05421512_107168 | Not Available | Negative | 2891889 - 2892539 | 22346.8 |
| sulfate permease, sulp family | SAMN05421512_107169 | Not Available | Positive | 2892811 - 2894565 | 59753.8 |
| phosphatidylethanolamine/phosphatidyl-n- methylethanolamine n-methyltransferase | SAMN05421512_107170 | Not Available | Negative | 2894547 - 2895152 | 22353.2 |
| glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein | SAMN05421512_107171 | Not Available | Negative | 2895265 - 2895669 | 13833.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
