Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxypyruvate isomerase | SAMN05421512_107122 | Not Available | Positive | 2846127 - 2846915 | 28063.5 |
| hypothetical protein | SAMN05421512_107123 | Not Available | Negative | 2846932 - 2847762 | 28840.3 |
| allantoin racemase | SAMN05421512_107124 | Not Available | Negative | 2847759 - 2848505 | 25381.5 |
| putative spermidine/putrescine transport system permease protein | SAMN05421512_107125 | Not Available | Negative | 2848519 - 2849346 | 30043.1 |
| putative spermidine/putrescine transport system permease protein | SAMN05421512_107126 | Not Available | Negative | 2849348 - 2850274 | 33671.3 |
| putative spermidine/putrescine transport system substrate-binding protein | SAMN05421512_107127 | Not Available | Negative | 2850360 - 2851664 | 47186.2 |
| putative spermidine/putrescine transport system atp-binding protein | SAMN05421512_107128 | Not Available | Negative | 2851702 - 2852790 | 38303.2 |
| transcriptional regulator, gntr family | SAMN05421512_107129 | Not Available | Positive | 2853049 - 2853762 | 25076.9 |
| cyclopropane-fatty-acyl-phospholipid synthase | SAMN05421512_107130 | Not Available | Negative | 2853759 - 2854982 | 46551.8 |
| transcriptional regulator, xre family with cupin sensor | SAMN05421512_107131 | Not Available | Negative | 2855132 - 2855698 | 20189.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
