Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase (nad+)/betaine-aldehyde dehydrogenase | SAMN05421512_107112 | Not Available | Positive | 2836023 - 2837480 | 50879.8 |
| dna-binding transcriptional regulator, fadr family | SAMN05421512_107113 | Not Available | Negative | 2837571 - 2838341 | 28695.3 |
| tripartite atp-independent transporter solute receptor, dctp family | SAMN05421512_107114 | Not Available | Positive | 2838548 - 2839531 | 35381.0 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN05421512_107115 | Not Available | Positive | 2839602 - 2840120 | 18800.4 |
| trap transporter, dctm subunit | SAMN05421512_107116 | Not Available | Positive | 2840117 - 2841394 | 44383.5 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05421512_107117 | Not Available | Positive | 2841426 - 2842175 | 25744.1 |
| nucleoside-diphosphate-sugar epimerase | SAMN05421512_107118 | Not Available | Positive | 2842266 - 2843249 | 34187.9 |
| 3-hydroxyisobutyrate dehydrogenase/2-hydroxy-3-oxopropionate reductase | SAMN05421512_107119 | Not Available | Positive | 2843246 - 2844208 | 32381.8 |
| uncharacterized conserved protein ygbk, duf1537 family | SAMN05421512_107120 | Not Available | Positive | 2844211 - 2845473 | 43048.3 |
| ribulose-5-phosphate 4-epimerase/fuculose-1-phosphate aldolase | SAMN05421512_107121 | Not Available | Positive | 2845470 - 2846120 | 23229.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
