Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421512_10782 | Not Available | Positive | 2804662 - 2805084 | 15262.2 |
| methionine aminopeptidase, type i | SAMN05421512_10783 | Not Available | Negative | 2805092 - 2805889 | 29174.9 |
| pard-like antitoxin of type ii toxin-antitoxin system | SAMN05421512_10784 | Not Available | Negative | 2805886 - 2806104 | 7704.2 |
| alkyldihydroxyacetonephosphate synthase | SAMN05421512_10785 | Not Available | Positive | 2806474 - 2807931 | 52730.2 |
| xylulokinase | SAMN05421512_10786 | Not Available | Positive | 2807924 - 2809426 | 52881.8 |
| carbohydrate abc transporter atp-binding protein, cut1 family | SAMN05421512_10787 | Not Available | Positive | 2809426 - 2810508 | 38824.4 |
| carbohydrate abc transporter substrate-binding protein, cut1 family | SAMN05421512_10788 | Not Available | Positive | 2810555 - 2811892 | 49575.4 |
| multiple sugar transport system permease protein | SAMN05421512_10789 | Not Available | Positive | 2812008 - 2812868 | 31705.7 |
| carbohydrate abc transporter membrane protein 2, cut1 family | SAMN05421512_10790 | Not Available | Positive | 2812865 - 2813701 | 30657.6 |
| glycerol dehydrogenase | SAMN05421512_10791 | Not Available | Positive | 2813708 - 2814754 | 36239.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
