Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system permease protein | SAMN05421512_10732 | Not Available | Positive | 2748599 - 2749540 | 33472.0 |
| peptide/nickel transport system permease protein/glutathione transport system permease protein | SAMN05421512_10733 | Not Available | Positive | 2749537 - 2750406 | 30528.2 |
| peptide/nickel transport system atp-binding protein/oligopeptide transport system atp-binding protein | SAMN05421512_10734 | Not Available | Positive | 2750415 - 2751428 | 36084.8 |
| oligopeptide transport system atp-binding protein | SAMN05421512_10735 | Not Available | Positive | 2751425 - 2752414 | 36416.1 |
| von willebrand factor type a domain-containing protein | SAMN05421512_10736 | Not Available | Negative | 2752634 - 2755171 | 88263.9 |
| hypothetical protein | SAMN05421512_10737 | Not Available | Negative | 2755195 - 2755881 | 23152.7 |
| hypothetical protein | SAMN05421512_10738 | Not Available | Negative | 2756021 - 2757019 | 35181.6 |
| transcriptional regulator, arac family | SAMN05421512_10739 | Not Available | Negative | 2757203 - 2758177 | 35261.1 |
| trap transporter, dctm subunit | SAMN05421512_10740 | Not Available | Negative | 2758339 - 2759640 | 45724.9 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN05421512_10741 | Not Available | Negative | 2759647 - 2760165 | 18381.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
