Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, gntr family | SAMN05421512_106319 | Not Available | Positive | 2713101 - 2713718 | 22925.5 |
| hypothetical protein | SAMN05421512_106320 | Not Available | Positive | 2714415 - 2714578 | 5657.69 |
| Trna-ala | Not Available | Not Available | Positive | 2716819 - 2716894 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 2716958 - 2717034 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 2720410 - 2720486 | Not Available |
| uncharacterized membrane protein | SAMN05421512_1077 | Not Available | Negative | 2720878 - 2721582 | 26787.3 |
| uncharacterized membrane protein hded, duf308 family | SAMN05421512_1078 | Not Available | Negative | 2721579 - 2722142 | 19891.3 |
| two-component system, ompr family, response regulator | SAMN05421512_1079 | Not Available | Positive | 2722310 - 2722987 | 25267.7 |
| signal transduction histidine kinase | SAMN05421512_10710 | Not Available | Positive | 2722974 - 2724341 | 49423.9 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN05421512_10711 | Not Available | Positive | 2724476 - 2724931 | 16745.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
