Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-2-oxoheptanedioate aldolase | SAMN05421512_106309 | Not Available | Positive | 2697541 - 2698314 | 27252.8 |
| hlyd family secretion protein | SAMN05421512_106310 | Not Available | Positive | 2699005 - 2699985 | 35035.2 |
| ribosome-dependent atpase | SAMN05421512_106311 | Not Available | Positive | 2699982 - 2702738 | 99937.2 |
| abc-2 type transport system permease protein | SAMN05421512_106312 | Not Available | Positive | 2702740 - 2703867 | 40447.2 |
| dna-binding transcriptional regulator, lysr family | SAMN05421512_106313 | Not Available | Negative | 2703895 - 2704794 | 32294.0 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN05421512_106314 | Not Available | Positive | 2704906 - 2705793 | 30143.7 |
| enoyl-coa hydratase/carnithine racemase | SAMN05421512_106315 | Not Available | Negative | 2705794 - 2706585 | 28086.1 |
| dna-binding transcriptional regulator, lysr family | SAMN05421512_106316 | Not Available | Negative | 2706675 - 2707586 | 32520.4 |
| crispr-associated endonuclease, csn1 family | SAMN05421512_106317 | Not Available | Positive | 2708129 - 2711452 | 125181.0 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05421512_106318 | Not Available | Negative | 2711981 - 2712826 | 31507.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
