Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421512_101105 | Not Available | Positive | 108695 - 109012 | 11621.7 |
| hypothetical protein | SAMN05421512_101106 | Not Available | Positive | 108990 - 109133 | 5238.41 |
| hypothetical protein | SAMN05421512_101107 | Not Available | Positive | 109164 - 109439 | 10126.8 |
| hypothetical protein | SAMN05421512_101108 | Not Available | Positive | 109420 - 109797 | 14262.6 |
| transglutaminase-like enzyme, putative cysteine protease | SAMN05421512_101109 | Not Available | Positive | 109867 - 110679 | 30828.9 |
| uncharacterized conserved protein, duf2267 family | SAMN05421512_101110 | Not Available | Negative | 110689 - 111108 | 15537.5 |
| transcriptional regulator, arac family | SAMN05421512_101111 | Not Available | Negative | 111118 - 112095 | 35143.6 |
| predicted arabinose efflux permease, mfs family | SAMN05421512_101112 | Not Available | Positive | 112161 - 113375 | 40790.7 |
| predicted arabinose efflux permease, mfs family | SAMN05421512_101113 | Not Available | Positive | 113590 - 114888 | 46975.1 |
| transcriptional regulator, arac family | SAMN05421512_101114 | Not Available | Positive | 115106 - 115975 | 32134.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
