Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-type dna-binding protein | SAMN05421512_106289 | Not Available | Negative | 2677836 - 2678870 | 36786.1 |
| primary-amine oxidase | SAMN05421512_106290 | Not Available | Negative | 2678947 - 2680941 | 73323.6 |
| cytochrome c oxidase accessory protein fixg | SAMN05421512_106291 | Not Available | Positive | 2681313 - 2682782 | 54705.3 |
| nitrogen fixation protein fixh | SAMN05421512_106292 | Not Available | Positive | 2682890 - 2683426 | 19258.5 |
| cu2+-exporting atpase | SAMN05421512_106293 | Not Available | Positive | 2683456 - 2685723 | 80110.7 |
| cytochrome oxidase maturation protein, cbb3-type | SAMN05421512_106294 | Not Available | Positive | 2685723 - 2685899 | 6352.59 |
| response regulator receiver domain-containing protein | SAMN05421512_106295 | Not Available | Positive | 2685950 - 2686450 | 18766.9 |
| hypothetical protein | SAMN05421512_106296 | Not Available | Negative | 2686552 - 2686743 | 6898.92 |
| Trna-thr | Not Available | Not Available | Positive | 2686948 - 2687022 | Not Available |
| hypothetical protein | SAMN05421512_106298 | Not Available | Positive | 2687277 - 2687411 | 5081.12 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
