Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator receiver domain-containing protein | SAMN05421512_106279 | Not Available | Positive | 2667361 - 2667699 | 12011.6 |
| crp/fnr family transcriptional regulator, anaerobic regulatory protein | SAMN05421512_106280 | Not Available | Positive | 2667921 - 2668619 | 25987.4 |
| oxygen-independent coproporphyrinogen-3 oxidase | SAMN05421512_106281 | Not Available | Negative | 2668737 - 2670086 | 49205.8 |
| hypothetical protein | SAMN05421512_106282 | Not Available | Positive | 2670258 - 2671295 | 36167.9 |
| protein n-acetyltransferase, rimj/riml family | SAMN05421512_106283 | Not Available | Negative | 2671301 - 2671864 | 21109.8 |
| cytochrome c oxidase cbb3-type subunit 1 | SAMN05421512_106284 | Not Available | Positive | 2672203 - 2673825 | 60684.5 |
| cytochrome c oxidase cbb3-type subunit 2 | SAMN05421512_106285 | Not Available | Positive | 2673838 - 2674572 | 27407.8 |
| cytochrome c oxidase cbb3-type subunit 4 | SAMN05421512_106286 | Not Available | Positive | 2674583 - 2674738 | 5769.79 |
| cytochrome c oxidase cbb3-type subunit 3 | SAMN05421512_106287 | Not Available | Positive | 2674742 - 2675620 | 31286.7 |
| hypothetical protein | SAMN05421512_106288 | Not Available | Positive | 2675874 - 2677766 | 67937.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
