Stappia indica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Stappiaceae

Genus

Stappia

Description

Stappia indica is a Gram-negative, rod-shaped bacterium that thrives optimally at a temperature of 32.0°C. This microbe is characterized by its distinct morphological and physiological traits, which align with the broader characteristics typically attributed to the genus Stappia. As a Gram-negative organism, Stappia indica possesses a thin peptidoglycan layer surrounded by an outer membrane, which contributes to its structural integrity and influences its interactions with the environment. Given its optimal growth temperature, Stappia indica may be well-suited to mesophilic environments, potentially indicating a niche within temperate ecosystems where the ambient temperature fluctuates around this range. While specific ecological roles and interactions are not detailed, the thermal preference suggests that Stappia indica could play a role in nutrient cycling or organic matter degradation in habitats that experience moderate temperatures. Furthermore, the rod shape of Stappia indica may confer advantages in motility and surface adherence, which are essential traits for colonization and interaction with various substrates. This morphology may also facilitate the microbe's ability to thrive in diverse environments, potentially contributing to a dynamic ecological role within its habitat. Understanding the physiological and environmental preferences of Stappia indica can provide insights into its potential functional contributions to microbial communities and ecosystem processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyStappiaceae
GenusStappia
SpeciesStappia indica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature32
Temperature rangemesophilic
HabitatMarine
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Stappia indica strain USBA 352 genome assembly, contig:

Gene Summary

Adenine Count

825960 bp

Thymine Count

819759 bp

Guanine Count

1662501 bp

Cytosine Count

1703840 bp

Genome Length

5015470 bp

Protein-coding Genes

4471 genes

Non-Coding Genes

155 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
response regulator receiver domain-containing proteinSAMN05421512_106279Not AvailablePositive2667361 - 266769912011.6
crp/fnr family transcriptional regulator, anaerobic regulatory proteinSAMN05421512_106280Not AvailablePositive2667921 - 266861925987.4
oxygen-independent coproporphyrinogen-3 oxidaseSAMN05421512_106281Not AvailableNegative2668737 - 267008649205.8
hypothetical proteinSAMN05421512_106282Not AvailablePositive2670258 - 267129536167.9
protein n-acetyltransferase, rimj/riml familySAMN05421512_106283Not AvailableNegative2671301 - 267186421109.8
cytochrome c oxidase cbb3-type subunit 1SAMN05421512_106284Not AvailablePositive2672203 - 267382560684.5
cytochrome c oxidase cbb3-type subunit 2SAMN05421512_106285Not AvailablePositive2673838 - 267457227407.8
cytochrome c oxidase cbb3-type subunit 4SAMN05421512_106286Not AvailablePositive2674583 - 26747385769.79
cytochrome c oxidase cbb3-type subunit 3SAMN05421512_106287Not AvailablePositive2674742 - 267562031286.7
hypothetical proteinSAMN05421512_106288Not AvailablePositive2675874 - 267776667937.1

Displaying genes 2561 – 2570 of 4626 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Bacterial peritonitisCausesPMC8271035

Displaying health effects 1 – 1 of 1 in total